# HG changeset patch
# User iuc
# Date 1630485384 0
# Node ID 8f26884c60b6f4a492c7ce8d646cd09fa72373e3
# Parent  36f4c569a594cab299b92267b8cb362c1b492c58
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit e0d4688a59e6eeba33adcfe803ac43d0bc2863e7"

diff -r 36f4c569a594 -r 8f26884c60b6 macros.xml
--- a/macros.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/macros.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -7,6 +7,11 @@
             <yield/>
         </requirements>
     </xml>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">seqtk</xref>
+        </xrefs>
+    </xml>
     <token name="@TOOL_VERSION@">1.3</token>
     <token name="@AWK_VERSION@">4.2.1</token>
     <xml name="stdio">
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_comp.xml
--- a/seqtk_comp.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_comp.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_comp" name="seqtk_comp" version="@TOOL_VERSION@.1">
     <description>get the nucleotide composition of FASTA/Q</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_cutN.xml
--- a/seqtk_cutN.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_cutN.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_cutN" name="seqtk_cutN" version="@TOOL_VERSION@.1">
     <description>cut sequence at long N</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_dropse.xml
--- a/seqtk_dropse.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_dropse.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_dropse" name="seqtk_dropse" version="@TOOL_VERSION@.1">
     <description>drop unpaired from interleaved Paired End FASTA/Q</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_fqchk.xml
--- a/seqtk_fqchk.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_fqchk.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_fqchk" name="seqtk_fqchk" version="@TOOL_VERSION@.1">
     <description>fastq QC (base/quality summary)</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_hety.xml
--- a/seqtk_hety.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_hety.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_hety" name="seqtk_hety" version="@TOOL_VERSION@.1">
     <description>regional heterozygosity</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_listhet.xml
--- a/seqtk_listhet.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_listhet.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_listhet" name="seqtk_listhet" version="@TOOL_VERSION@.1">
     <description>extract the position of each het</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_mergefa.xml
--- a/seqtk_mergefa.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_mergefa.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_mergefa" name="seqtk_mergefa" version="@TOOL_VERSION@.1">
     <description>merge two FASTA/Q files</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_mergepe.xml
--- a/seqtk_mergepe.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_mergepe.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_mergepe" name="seqtk_mergepe" version="@TOOL_VERSION@.1">
     <description>interleave two unpaired FASTA/Q files for a paired-end file</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_mutfa.xml
--- a/seqtk_mutfa.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_mutfa.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_mutfa" name="seqtk_mutfa" version="@TOOL_VERSION@.1">
     <description>point mutate FASTA at specified positions</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_randbase.xml
--- a/seqtk_randbase.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_randbase.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_randbase" name="seqtk_randbase" version="@TOOL_VERSION@.1">
     <description>choose a random base from hets</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_sample.xml
--- a/seqtk_sample.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_sample.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_sample" name="seqtk_sample" version="@TOOL_VERSION@.2">
     <description>random subsample of fasta or fastq sequences</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_seq.xml
--- a/seqtk_seq.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_seq.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_seq" name="seqtk_seq" version="@TOOL_VERSION@.3">
     <description>common transformation of FASTA/Q</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_subseq.xml
--- a/seqtk_subseq.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_subseq.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_subseq" name="seqtk_subseq" version="@TOOL_VERSION@.1">
     <description>extract subsequences from FASTA/Q files</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
         <requirement type="package" version="@AWK_VERSION@">gawk</requirement>
diff -r 36f4c569a594 -r 8f26884c60b6 seqtk_trimfq.xml
--- a/seqtk_trimfq.xml	Tue Sep 10 13:58:18 2019 -0400
+++ b/seqtk_trimfq.xml	Wed Sep 01 08:36:24 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="seqtk_trimfq" name="seqtk_trimfq" version="@TOOL_VERSION@.1">
     <description>trim FASTQ using the Phred algorithm</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>