Mercurial > repos > iuc > seqtk

diff seqtk_seq.xml @ 16:48a51c72f5e7 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit ad43df79dca3dc7c3511c6eb2ccf8589d2804eb2
author iuc
date Wed, 17 Oct 2018 05:58:58 -0400
parents 16f2535c08bf
children 069c8f0695ee
line wrap: on
line diff
--- a/seqtk_seq.xml	Mon Jun 05 13:26:30 2017 -0400
+++ b/seqtk_seq.xml	Wed Oct 17 05:58:58 2018 -0400
@@ -31,7 +31,7 @@
     -V
 #end if
 '$in_file'
-> '$default'
+@CONDITIONAL_GZIP_OUT@
     ]]></command>
     <inputs>
         <expand macro="in_faq"/>
@@ -66,6 +66,12 @@
             <param name="n" value=""/>
             <output name="default" file="seqtk_seq_revcom.fa" ftype="fasta"/>
         </test>
+        <test>
+            <param name="in_file" value="seqtk_seq.fa.gz" ftype="fasta.gz"/>
+            <param name="r" value="True"/>
+            <param name="n" value=""/>
+            <output name="default" file="seqtk_seq_revcom.fa.gz" ftype="fasta.gz"/>
+        </test>
     </tests>
     <help><![CDATA[
 **What it does**