Mercurial > repos > iuc > seqtk
comparison seqtk_mergepe.xml @ 19:36f4c569a594 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/seqtk commit 35c8480f525d211d5e9996086c60b2c6d4f89146"
| author | iuc |
|---|---|
| date | Tue, 10 Sep 2019 13:58:18 -0400 |
| parents | 069c8f0695ee |
| children | 8f26884c60b6 |
comparison
equal
deleted
inserted
replaced
| 18:1d63dbcecb10 | 19:36f4c569a594 |
|---|---|
| 8 <expand macro="stdio"/> | 8 <expand macro="stdio"/> |
| 9 <command><![CDATA[ | 9 <command><![CDATA[ |
| 10 seqtk mergepe | 10 seqtk mergepe |
| 11 '$in_fq1' | 11 '$in_fq1' |
| 12 '$in_fq2' | 12 '$in_fq2' |
| 13 #echo "| pigz --no-name --no-time" if $in_fq1.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default' | 13 #echo "| pigz -p ${GALAXY_SLOTS:-1} --no-name --no-time" if $in_fq1.is_of_type('fasta.gz', 'fastq.gz') else "" # > '$default' |
| 14 ]]></command> | 14 ]]></command> |
| 15 <inputs> | 15 <inputs> |
| 16 <param name="in_fq1" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input FASTA/Q file #1"/> | 16 <param name="in_fq1" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input FASTA/Q file #1"/> |
| 17 <param name="in_fq2" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input FASTA/Q file #2"/> | 17 <param name="in_fq2" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Input FASTA/Q file #2"/> |
| 18 </inputs> | 18 </inputs> |