# HG changeset patch
# User iuc
# Date 1615899470 0
# Node ID f74735a64736ea88858cfb68a7bdc45107ff4bea
# Parent aab193557a1df73c990a2813620bd8078468c858
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit 7b8af82cb8a3438d2a6535986e357527e5c6efec"
diff -r aab193557a1d -r f74735a64736 cluster_reduce_dimension.xml
--- a/cluster_reduce_dimension.xml Wed May 20 12:20:33 2020 +0000
+++ b/cluster_reduce_dimension.xml Tue Mar 16 12:57:50 2021 +0000
@@ -3,7 +3,7 @@
macros.xml
-
+
@@ -46,7 +46,7 @@
]]>
- louvain
+ louvain
-
@@ -382,7 +381,7 @@
-
+
@@ -455,7 +453,6 @@
diff -r aab193557a1d -r f74735a64736 macros.xml
--- a/macros.xml Wed May 20 12:20:33 2020 +0000
+++ b/macros.xml Tue Mar 16 12:57:50 2021 +0000
@@ -1,13 +1,12 @@
- 1.4.4.post1
+ 1.7.1
19.01
-
+
scanpy
loompy
- h5py
- leidenalg
+ leidenalg
@@ -29,9 +28,6 @@
]]>
-
-
-
@@ -781,7 +774,6 @@
#end if
linewidth=$method.seaborn_violinplot.linewidth,
color='$method.seaborn_violinplot.color',
- palette='$method.seaborn_violinplot.palette',
saturation=$method.seaborn_violinplot.saturation
]]>
@@ -1005,7 +997,7 @@
-
+
diff -r aab193557a1d -r f74735a64736 test-data/pl.rank_genes_groups_dotplot.rank_genes_groups.krumsiek11.png
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diff -r aab193557a1d -r f74735a64736 test-data/pl.rank_genes_groups_stacked_violin.rank_genes_groups.krumsiek11.png
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diff -r aab193557a1d -r f74735a64736 test-data/pl.scatter.umap.pbmc68k_reduced.png
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diff -r aab193557a1d -r f74735a64736 test-data/pl.stacked_violin.krumsiek11.png
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diff -r aab193557a1d -r f74735a64736 test-data/pl.violin.pbmc68k_reduced_custom.png
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diff -r aab193557a1d -r f74735a64736 test-data/pp.highly_variable_genes.seurat.blobs.h5ad
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diff -r aab193557a1d -r f74735a64736 test-data/pp.recipe_seurat.recipe_zheng17.h5ad
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diff -r aab193557a1d -r f74735a64736 test-data/pp.recipe_zheng17.random-randint.h5ad
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diff -r aab193557a1d -r f74735a64736 test-data/tl.rank_genes_groups.krumsiek11.h5ad
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