# HG changeset patch # User iuc # Date 1615899470 0 # Node ID f74735a64736ea88858cfb68a7bdc45107ff4bea # Parent aab193557a1df73c990a2813620bd8078468c858 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/scanpy/ commit 7b8af82cb8a3438d2a6535986e357527e5c6efec" diff -r aab193557a1d -r f74735a64736 cluster_reduce_dimension.xml --- a/cluster_reduce_dimension.xml Wed May 20 12:20:33 2020 +0000 +++ b/cluster_reduce_dimension.xml Tue Mar 16 12:57:50 2021 +0000 @@ -3,7 +3,7 @@ macros.xml - + @@ -46,7 +46,7 @@ ]]> - louvain + louvain - @@ -382,7 +381,7 @@ - + @@ -455,7 +453,6 @@ - diff -r aab193557a1d -r f74735a64736 macros.xml --- a/macros.xml Wed May 20 12:20:33 2020 +0000 +++ b/macros.xml Tue Mar 16 12:57:50 2021 +0000 @@ -1,13 +1,12 @@ - 1.4.4.post1 + 1.7.1 19.01 - + scanpy loompy - h5py - leidenalg + leidenalg @@ -29,9 +28,6 @@ ]]> - - - @@ -781,7 +774,6 @@ #end if linewidth=$method.seaborn_violinplot.linewidth, color='$method.seaborn_violinplot.color', - palette='$method.seaborn_violinplot.palette', saturation=$method.seaborn_violinplot.saturation ]]> @@ -1005,7 +997,7 @@ - + diff -r aab193557a1d -r f74735a64736 test-data/pl.rank_genes_groups_dotplot.rank_genes_groups.krumsiek11.png Binary file test-data/pl.rank_genes_groups_dotplot.rank_genes_groups.krumsiek11.png has changed diff -r aab193557a1d -r f74735a64736 test-data/pl.rank_genes_groups_stacked_violin.rank_genes_groups.krumsiek11.png Binary file test-data/pl.rank_genes_groups_stacked_violin.rank_genes_groups.krumsiek11.png has changed diff -r aab193557a1d -r f74735a64736 test-data/pl.scatter.umap.pbmc68k_reduced.png Binary file test-data/pl.scatter.umap.pbmc68k_reduced.png has changed diff -r aab193557a1d -r f74735a64736 test-data/pl.stacked_violin.krumsiek11.png Binary file test-data/pl.stacked_violin.krumsiek11.png has changed diff -r aab193557a1d -r f74735a64736 test-data/pl.violin.pbmc68k_reduced_custom.png Binary file test-data/pl.violin.pbmc68k_reduced_custom.png has changed diff -r aab193557a1d -r f74735a64736 test-data/pp.highly_variable_genes.seurat.blobs.h5ad Binary file test-data/pp.highly_variable_genes.seurat.blobs.h5ad has changed diff -r aab193557a1d -r f74735a64736 test-data/pp.recipe_seurat.recipe_zheng17.h5ad Binary file test-data/pp.recipe_seurat.recipe_zheng17.h5ad has changed diff -r aab193557a1d -r f74735a64736 test-data/pp.recipe_zheng17.random-randint.h5ad Binary file test-data/pp.recipe_zheng17.random-randint.h5ad has changed diff -r aab193557a1d -r f74735a64736 test-data/tl.rank_genes_groups.krumsiek11.h5ad Binary file test-data/tl.rank_genes_groups.krumsiek11.h5ad has changed