# HG changeset patch
# User iuc
# Date 1432867784 14400
# Node ID 9e6dc9be20e99958b97194f4158344a8a77355e9
# Parent  20fd58742f905efab34dae0d7bf70f0d1e3155e4
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/progressivemauve commit cd6b7a00328235f15dbceaeec8f6549a23dd215e

diff -r 20fd58742f90 -r 9e6dc9be20e9 progressivemauve.xml
--- a/progressivemauve.xml	Mon May 25 23:01:44 2015 -0400
+++ b/progressivemauve.xml	Thu May 28 22:49:44 2015 -0400
@@ -113,7 +113,7 @@
       <param type="integer" label="Seed weight" name="seed_weight" value="0" optional="True"
           help="Use the specified seed weight for calculating initial anchors (--seed-weight)" />
 
-      <param type="data" format="tabular" label="Match Input" name="match_input"
+      <param type="data" format="tabular" label="Match Input" name="match_input" optional="True"
           help="Use specified match file instead of searching for matches (--match-input)" />
 
     <!--<param type="file" label="input-id-matrix" help="An identity matrix describing similarity among all pairs of input sequences/alignments (- -input-id-matrix)" />-->
@@ -185,15 +185,15 @@
         help="Disable recursive anchor search (--no-recursion)" />
   </inputs>
   <outputs>
-    <data format="xmfa" name="output">
+    <data format="xmfa" name="output" label="${tool.name} alignment of ${on_string}">
        <change_format>
            <when input="mums" value="--mums" format="tabular" />
        </change_format>
     </data>
-    <data format="nhx" name="output_guide_tree_file">
+    <data format="nhx" name="output_guide_tree_file" label="${tool.name} alignment of ${on_string}: Guide tree">
         <when>output_guide_tree</when>
     </data>
-    <data format="tabular" name="output_backbone_file">
+    <data format="tabular" name="output_backbone_file" label="${tool.name} alignment of ${on_string}: Backbone">
         <when>output_backbone</when>
     </data>
   </outputs>