Mercurial > repos > iuc > package_trinity_2_1_1
comparison tool_dependencies.xml @ 1:74d616d566f3 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_trinity_2_1_1 commit bbfd77c34b609b86ef3a24525dae1127d8b3d99b
| author | iuc |
|---|---|
| date | Mon, 02 May 2016 16:12:18 -0400 |
| parents | bfd7596eecbe |
| children | c550c572d8b8 |
comparison
equal
deleted
inserted
replaced
| 0:bfd7596eecbe | 1:74d616d566f3 |
|---|---|
| 107 https://depot.galaxyproject.org/software/amap/amap_0.8-7_src_all.tar.gz | 107 https://depot.galaxyproject.org/software/amap/amap_0.8-7_src_all.tar.gz |
| 108 </package> | 108 </package> |
| 109 <package sha256sum="0f67391d3fd6bc970293b5eb11dcd14f15686b61bce1c6da03e16dc3a60e93f2"> | 109 <package sha256sum="0f67391d3fd6bc970293b5eb11dcd14f15686b61bce1c6da03e16dc3a60e93f2"> |
| 110 https://depot.galaxyproject.org/software/ctc/ctc_1.44.0_src_all.tar.gz | 110 https://depot.galaxyproject.org/software/ctc/ctc_1.44.0_src_all.tar.gz |
| 111 </package> | 111 </package> |
| 112 <package sha256sum="d16ad5910aee6247990a19745511a5d50e19fa8c236000cbf99395e06c73c9f8"> | |
| 113 https://depot.galaxyproject.org/software/BiocGenerics/BiocGenerics_0.14.0_src_all.tar.gz | |
| 114 </package> | |
| 112 <package sha256sum="f16b6316fdbd7ab0077644d41a3286a688b0b75cc34686383e10f139f0955ae1"> | 115 <package sha256sum="f16b6316fdbd7ab0077644d41a3286a688b0b75cc34686383e10f139f0955ae1"> |
| 113 https://depot.galaxyproject.org/software/biobase/biobase_2.30.0_src_all.tar.gz | 116 https://depot.galaxyproject.org/software/Biobase/Biobase_2.30.0_src_all.tar.gz |
| 114 </package> | 117 </package> |
| 115 </action> | 118 </action> |
| 116 | 119 |
| 117 <action type="shell_command">sed -i.bak -e 's/-ltinfo//' trinity-plugins/Makefile</action> <!-- tinfo is included in ncurses lib--> | 120 <action type="shell_command">sed -i.bak -e 's/-ltinfo//' trinity-plugins/Makefile</action> <!-- tinfo is included in ncurses lib--> |
| 118 <action type="shell_command">sed -i.bak -e '/tar xvf samtools-0.1.19.tar.bz2/a \\tsed -i.bak -e "s|-lcurses|-lncurses|" samtools-0.1.19/Makefile samtools-0.1.19/Makefile' trinity-plugins/Makefile</action> <!-- ncurses instead of curses --> | 121 <action type="shell_command">sed -i.bak -e '/tar xvf samtools-0.1.19.tar.bz2/a \\tsed -i.bak -e "s|-lcurses|-lncurses|" samtools-0.1.19/Makefile samtools-0.1.19/Makefile' trinity-plugins/Makefile</action> <!-- ncurses instead of curses --> |