Mercurial > repos > iuc > package_tabix_0_2_6
changeset 1:54f8b9bf9b6c draft default tip
Uploaded
author | iuc |
---|---|
date | Wed, 18 Feb 2015 11:35:26 -0500 |
parents | c1743e071a28 |
children | |
files | tool_dependencies.xml |
diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/tool_dependencies.xml Wed Aug 06 17:19:24 2014 -0400 +++ b/tool_dependencies.xml Wed Feb 18 11:35:26 2015 -0500 @@ -23,10 +23,10 @@ Installs tabix version 0.2.6. Available binaries: tabix, bgzip http://samtools.sourceforge.net/tabix.shtml - Tabix indexes a TAB-delimited genome position file in.tab.bgz and creates an index file in.tab.bgz.tbi when region is absent from the command-line. - The input data file must be position sorted and compressed by bgzip which has a gzip(1) like interface. After indexing, - tabix is able to quickly retrieve data lines overlapping regions specified in the format "chr:beginPos-endPos". - Fast data retrieval also works over network if URI is given as a file name and in this case the index file will be downloaded if it is not present locally. + Tabix indexes a TAB-delimited genome position file in.tab.bgz and creates an index file in.tab.bgz.tbi when region is absent from the command-line. + The input data file must be position sorted and compressed by bgzip which has a gzip(1) like interface. After indexing, + tabix is able to quickly retrieve data lines overlapping regions specified in the format "chr:beginPos-endPos". + Fast data retrieval also works over network if URI is given as a file name and in this case the index file will be downloaded if it is not present locally. </readme> </package> </tool_dependency>