Mercurial > repos > iuc > package_samtools_1_0
changeset 8:9f8c81d36fec draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_samtools_1_0 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
| author | iuc |
|---|---|
| date | Thu, 16 Jul 2015 13:30:55 -0400 |
| parents | 0483649252f7 |
| children | a2b05f6917d5 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/tool_dependencies.xml Mon Jun 01 22:50:15 2015 -0400 +++ b/tool_dependencies.xml Thu Jul 16 13:30:55 2015 -0400 @@ -26,8 +26,8 @@ <package name="zlib" version="1.2.8" /> </repository> </action> - <action type="shell_command">sed -i -e 's/-lcurses/-lncurses/' Makefile</action> - <action type="shell_command">sed -i -e "s|CFLAGS=\s*-g\s*-Wall\s*-O2\s*|CFLAGS= -g -Wall -O2 -I$NCURSES_INCLUDE_PATH/ncurses/ -I$NCURSES_INCLUDE_PATH -L$NCURSES_LIB_PATH|g" Makefile</action> + <action type="shell_command">sed -i.bak -e 's/-lcurses/-lncurses/' Makefile</action> + <action type="shell_command">sed -i.bak -e "s|CFLAGS=\s*-g\s*-Wall\s*-O2\s*|CFLAGS= -g -Wall -O2 -I$NCURSES_INCLUDE_PATH/ncurses/ -I$NCURSES_INCLUDE_PATH -L$NCURSES_LIB_PATH|g" Makefile</action> <action type="shell_command">make</action> <action type="move_file"> <source>samtools</source>