# HG changeset patch
# User bgruening
# Date 1380557910 14400
# Node ID cfa5225f7807d82086f30a826d80b1fccdb9a003
# Parent  8b4f803b10d78f05641ce582cb617294649e70d9
Uploaded

diff -r 8b4f803b10d7 -r cfa5225f7807 tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Sep 27 16:39:00 2013 -0400
+++ b/tool_dependencies.xml	Mon Sep 30 12:18:30 2013 -0400
@@ -1,20 +1,29 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <!--<package name="readline" version="6.2">
-        <repository name="package_readline_6_2" owner="iuc" prior_installation_required="True" />
-    </package>-->
+    <package name="atlas" version="3.10.1">
+        <repository changeset_revision="196caf0a85e9" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="readline" version="6.2">
+        <repository changeset_revision="9f3610d5a25b" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
     <package name="R_3_0_1" version="3.0.1">
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://cran.ms.unimelb.edu.au/src/base/R-3/R-3.0.1.tar.gz</action>
-                <!--<action type="set_environment_for_install">
-                    <repository name="package_readline_6_2" owner="iuc">
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="196caf0a85e9" name="package_atlas_3_10" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
+                        <package name="atlas" version="3.10.1" />
+                    </repository>
+                    <repository changeset_revision="9f3610d5a25b" name="package_readline_6_2" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
                         <package name="readline" version="6.2" />
                     </repository>
-                </action>-->
+                </action>
 
-                <action type="template_command" language="cheetah">
+                <action language="cheetah" type="template_command">
                     #set $cmd = './configure'
+                    #if env.get('ATLAS_LIB_DIR', False):
+                        #set $cmd += ' --with-blas="-L%s -lptf77blas -lpthread -latlas" ' % $env.ATLAS_LIB_DIR
+                    #end if
 
                     #if env.get('READLINE_LIB_PATH', False):
                         export LDFLAGS=-L$env.READLINE_LIB_PATH &amp;&amp;