comparison tool_dependencies.xml @ 32:2933abfd8081 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7 commit 45a64d82dfada34d826be98a1f7a0657f9148d59-dirty
author galaxyp
date Sun, 31 May 2015 11:35:56 -0400
parents fb14ceede7bc
children e0be0df96110
comparison
equal deleted inserted replaced
31:fb14ceede7bc 32:2933abfd8081
5 </package> 5 </package>
6 <package name="readline" version="6.2"> 6 <package name="readline" version="6.2">
7 <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="bzlib" version="1.0.6"> 9 <package name="bzlib" version="1.0.6">
10 <repository changeset_revision="318cd7b46435" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="593cc77357d6" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="xz" version="5.0.5"> 12 <package name="xz" version="5.0.5">
13 <repository changeset_revision="93412ba5fea5" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="93412ba5fea5" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <!-- 15 <!--
22 </package> 22 </package>
23 <package name="gdbm" version="1.11"> 23 <package name="gdbm" version="1.11">
24 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 24 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
25 </package> 25 </package>
26 <package name="ncurses" version="5.9"> 26 <package name="ncurses" version="5.9">
27 <repository changeset_revision="c0735727b530" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 27 <repository changeset_revision="b908140c6868" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
28 </package> 28 </package>
29 <package name="python" version="2.7"> 29 <package name="python" version="2.7">
30 <install version="1.0"> 30 <install version="1.0">
31 <actions> 31 <actions>
32 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action> 32 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action>
36 <package name="zlib" version="1.2.8" /> 36 <package name="zlib" version="1.2.8" />
37 </repository> 37 </repository>
38 <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 38 <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
39 <package name="readline" version="6.2" /> 39 <package name="readline" version="6.2" />
40 </repository> 40 </repository>
41 <repository changeset_revision="318cd7b46435" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 41 <repository changeset_revision="593cc77357d6" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
42 <package name="bzlib" version="1.0.6" /> 42 <package name="bzlib" version="1.0.6" />
43 </repository> 43 </repository>
44 <repository changeset_revision="93412ba5fea5" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 44 <repository changeset_revision="93412ba5fea5" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
45 <package name="xz" version="5.0.5" /> 45 <package name="xz" version="5.0.5" />
46 </repository> 46 </repository>
53 </repository> 53 </repository>
54 --> 54 -->
55 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 55 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
56 <package name="gdbm" version="1.11" /> 56 <package name="gdbm" version="1.11" />
57 </repository> 57 </repository>
58 <repository changeset_revision="c0735727b530" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 58 <repository changeset_revision="b908140c6868" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
59 <package name="ncurses" version="5.9" /> 59 <package name="ncurses" version="5.9" />
60 </repository> 60 </repository>
61 </action> 61 </action>
62 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. --> 62 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->
63 <action type="shell_command">sed -i -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action> 63 <action type="shell_command">sed -i -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action>
80 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> 80 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable> 81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable>
82 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable> 82 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
83 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable> 83 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
84 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable> 84 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
85
86 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[BZLIB_LIB_DIR]</environment_variable>
87 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[BZLIB_LIB_DIR]/source</environment_variable>
88
85 <!-- 89 <!--
86 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/pkgconfig</environment_variable> 90 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/pkgconfig</environment_variable>
87 <environment_variable action="prepend_to" name="LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable> 91 <environment_variable action="prepend_to" name="LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>
88 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable> 92 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>
89 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable> 93 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable>