Mercurial > repos > iuc > package_prokka_1_10

changeset 1:6e92dfd68f7e draft default tip

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Uploaded
author iuc
date Mon, 12 Jan 2015 08:05:16 -0500
parents ad3d1d8ca3cc
children
files tool_dependencies.xml
diffstat 1 files changed, 10 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Jan 08 12:43:34 2015 -0500
+++ b/tool_dependencies.xml	Mon Jan 12 08:05:16 2015 -0500
@@ -10,6 +10,16 @@
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://www.vicbioinformatics.com/prokka-1.10.tar.gz</action>
+
+                <action type="set_environment_for_install">
+                   <repository changeset_revision="2ba4c9419ceb" name="package_perl_xml_simple_2_20" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="perl_xml_simple" version="2.20" />
+                    </repository>
+                    <repository changeset_revision="bd1fcedd9aad" name="package_bioperl_1_6" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="bioperl" version="1.6.922" />
+                    </repository>
+                </action>
+
                 <action type="shell_command">bin/prokka --setupdb</action>
                 <action type="move_directory_files">
                     <source_directory>.</source_directory>