Mercurial > repos > iuc > package_peptideshaker_0_35

changeset 0:e566c2da0d8c draft default tip

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author iuc
date Mon, 16 Feb 2015 04:07:41 -0500
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files tool_dependencies.xml
diffstat 1 files changed, 24 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Feb 16 04:07:41 2015 -0500
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+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="peptide_shaker" version="0.37">
+    <install version="1.0">
+        <actions>
+            <action type="download_by_url">http://share.gruenings.eu/PeptideShaker-0.37.4-beta.zip</action>
+            <action type="shell_command">chmod -R o+w resources</action>
+            <action type="move_directory_files">
+                <source_directory>.</source_directory>
+                <destination_directory>$INSTALL_DIR/</destination_directory>
+            </action>
+            <action type="set_environment">
+                <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
+                <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-0.37.4-beta.jar</environment_variable>
+            </action>
+        </actions>
+    </install>
+    <readme>
+        Install Galaxy package application for PeptideShaker 0.37.4.
+        http://peptide-shaker.googlecode.com 
+    </readme>
+  </package>
+</tool_dependency>