# HG changeset patch
# User iuc
# Date 1444381757 14400
# Node ID 816d3480b0b15acd3f258fec3ea4056dcefed802
# Parent  43cb426cb05d2b12d88b13c11217c6948e8fb200
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921

diff -r 43cb426cb05d -r 816d3480b0b1 tool_dependencies.xml
--- a/tool_dependencies.xml	Sat May 23 22:51:09 2015 -0400
+++ b/tool_dependencies.xml	Fri Oct 09 05:09:17 2015 -0400
@@ -1,32 +1,33 @@
 <?xml version="1.0"?>
 <tool_dependency>
-        <package name="atlas" version="3.10.2">
-            <repository changeset_revision="4778b172b895" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-        </package>
-        <package name="numpy" version="1.9">
-            <install version="1.0">
-                <actions>
-                    <action type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.0.tar.gz#md5=510cee1c6a131e0a9eb759aa2cc62609</action>
-                    <action type="make_directory">$INSTALL_DIR/lib/python</action>
-                    <action type="set_environment_for_install">
-                        <repository changeset_revision="4778b172b895" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                            <package name="atlas" version="3.10.2" />
-                        </repository>
-                    </action>
-                    <action type="shell_command">
-                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
-                        export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
-                        python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
-                    </action>
-                    <action type="set_environment">
-                        <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
-                        <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
-                        <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable>
-                        <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable>
-                        <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable>
-                    </action>
-                </actions>
-            </install>
-            <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme>
-        </package>
+    <package name="atlas" version="3.10.2">
+        <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="numpy" version="1.9">
+        <install version="1.0">
+            <actions>
+                <action md5sum="a1ed53432dbcd256398898d35bc8e645" type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.2.tar.gz</action>
+                <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="atlas" version="3.10.2" />
+                    </repository>
+                </action>
+                <action type="shell_command">
+                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
+                    export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
+                    python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable>
+                    <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR</environment_variable>
+                    <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme>
+    </package>
 </tool_dependency>