# HG changeset patch
# User iuc
# Date 1423674149 18000
# Node ID 266529386609daeb1eca2fd4b01821844a68955d
# Parent  dd91d64330d44f441be4050e8ea7cfe92a859a36
Uploaded

diff -r dd91d64330d4 -r 266529386609 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Jan 27 15:14:46 2015 -0500
+++ b/tool_dependencies.xml	Wed Feb 11 12:02:29 2015 -0500
@@ -3,26 +3,24 @@
         <package name="atlas" version="3.10.2">
             <repository changeset_revision="d5b1c7875b7b" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
         </package>
-    <package name="python" version="2.7">
-        <repository changeset_revision="2c52c900e56a" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
-    </package>
         <package name="numpy" version="1.9">
             <install version="1.0">
                 <actions>
+                    <action type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.0.tar.gz#md5=510cee1c6a131e0a9eb759aa2cc62609</action>
+                    <action type="make_directory">$INSTALL_DIR/lib/python</action>
                     <action type="set_environment_for_install">
                         <repository changeset_revision="d5b1c7875b7b" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                             <package name="atlas" version="3.10.2" />
                         </repository>
                     </action>
-                    <action type="setup_python_environment">
-                       <repository changeset_revision="2c52c900e56a" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
-                           <package name="python" version="2.7" />
-                       </repository>
-                        <!-- allow downloading and installing an Python package from https://pypi.org/ -->
-                        <package>https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz</package>
+                    <action type="shell_command">
+                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
+                        export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
+                        python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                     </action>
                     <action type="set_environment">
-                        <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
+                        <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                        <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                         <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable>
                         <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable>
                     </action>