Mercurial > repos > iuc > package_eigen_3_1

changeset 6:de8798991a6a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_3_1 commit baa6a1ec8b3c440cdf73409ccaafcd303e9f4e72
author iuc
date Mon, 30 Nov 2015 20:28:55 -0500
parents 43f1ac6314d1
children
files tool_dependencies.xml
diffstat 1 files changed, 19 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Nov 19 13:17:19 2015 -0500
+++ b/tool_dependencies.xml	Mon Nov 30 20:28:55 2015 -0500
@@ -1,25 +1,36 @@
+<?xml version="1.0"?>
 <tool_dependency>
+    <package name="cmake" version="3.2.3">
+        <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
     <package name="eigen3" version="3.1.3">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">http://bitbucket.org/eigen/eigen/get/3.1.3.tar.gz</action>
+                <action sha256sum="2ea0ba3eb9ac7ec623d8be92be4ee651191532cb311e0c979d65da9bc6c5143a" target_filename="eigen-eigen-2249f9c22fe8.tgz" type="download_by_url">http://bitbucket.org/eigen/eigen/get/3.1.3.tar.gz</action>
+
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="cmake" version="3.2.3" />
+                    </repository>
+                </action>
+
                 <action type="make_directory">$INSTALL_DIR/unpacked_source</action>
                 <action type="shell_command">cp -r * $INSTALL_DIR/unpacked_source</action>
                 <action type="make_directory">build</action>
                 <action type="change_directory">build</action>
+
                 <action type="shell_command">cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/eigen3/</action>
                 <action type="make_install" />
 
                 <action type="set_environment">
-                    <environment_variable name="EIGEN3_SOURCE_PATH" action="set_to">$INSTALL_DIR/unpacked_source</environment_variable>
-                    <environment_variable name="EIGEN3_INCLUDE_PATH" action="set_to">$INSTALL_DIR/eigen3/include</environment_variable>
-                    <environment_variable name="EIGEN3_LIB_PATH" action="set_to">$INSTALL_DIR/eigen3/lib</environment_variable>
-                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/eigen3/lib</environment_variable>
-                    <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/eigen3/include</environment_variable>
-                    <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/eigen3/include</environment_variable>
+                    <environment_variable action="set_to" name="EIGEN3_SOURCE_PATH">$INSTALL_DIR/unpacked_source</environment_variable>
+                    <environment_variable action="set_to" name="EIGEN3_INCLUDE_PATH">$INSTALL_DIR/eigen3/include</environment_variable>
+                    <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/eigen3/include</environment_variable>
+                    <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$INSTALL_DIR/eigen3/include</environment_variable>
+                    <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/eigen3/share/pkgconfig</environment_variable>
                 </action>
             </actions>
         </install>
-        <readme>Downloading  and compiling the eigen3 library and unpacking it to the EIGEN3_SOURCE_PATH. EIGEN3_INCLUDE_PATH and EIGEN3_LIB_PATH will be available.</readme>
+        <readme>Downloading and compiling the eigen3 library and unpacking it to the EIGEN3_SOURCE_PATH. EIGEN3_INCLUDE_PATH will be available.</readme>
     </package>
 </tool_dependency>