view tool_dependencies.xml @ 15:4571a1e192e2 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bzlib_1_0 commit fdfb58648bf02f85eb59bdb5b2b5d30d6ac116ef-dirty
author bgruening
date Sat, 10 Oct 2015 04:30:00 -0400
parents 6ebf4fdf5359
children f510d17420fb
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 <tool_dependency>
    <package name="bzlib" version="1.0.6">
        <install version="1.0">
            <actions>
                <!-- first action is always downloading -->
                <action type="download_by_url">http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz</action>
                <action type="shell_command">
                    unamestr=`uname` &amp;&amp;
                    if [[ "$unamestr" == 'Linux' ]]; then
                        make -f Makefile-libbz2_so &amp;&amp;
                        make &amp;&amp;
                        make install PREFIX=$INSTALL_DIR/bzlib &amp;&amp;
                        cp bzip2-shared $INSTALL_DIR/bzlib/bin/bzip2 &amp;&amp;
                        cp -a libbz2.so* $INSTALL_DIR/bzlib/lib &amp;&amp;
                        ln -s libbz2.so.1.0 $INSTALL_DIR/bzlib/lib/libbz2.so
                    elif [[ "$unamestr" == 'Darwin' ]]; then
                        make &amp;&amp;
                        make install PREFIX=$INSTALL_DIR/bzlib
                    fi
                </action>
                <action type="move_directory_files">
                    <source_directory>./</source_directory>
                    <destination_directory>$INSTALL_DIR/bzlib/source</destination_directory>
                </action>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bzlib/bin</environment_variable>
                    <environment_variable name="BZLIB_LIB_DIR" action="set_to">$INSTALL_DIR/bzlib/lib</environment_variable>
                    <environment_variable name="BZLIB_INCLUDE_DIR" action="set_to">$INSTALL_DIR/bzlib/include</environment_variable>
                    <environment_variable name="BZLIB_SOURCE_DIR" action="set_to">$INSTALL_DIR/bzlib/source</environment_variable>
                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/lib</environment_variable>
                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/source</environment_variable>
                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/lib</environment_variable>
                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/source</environment_variable>
                    <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/bzlib/include</environment_variable>
                    <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/bzlib/include</environment_variable>
                </action>
            </actions>
        </install>
        <readme>Compiling bzlib requires make and a C compiler. You can access bzlib with $BZLIB_LIB_DIR and $BZLIB_INCLUDE_DIR.</readme>
    </package>
</tool_dependency>