# HG changeset patch
# User iuc
# Date 1422399091 18000
# Node ID b0ef20ca0e03b06538805310380fa682c29fefec

Uploaded

diff -r 000000000000 -r b0ef20ca0e03 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Jan 27 17:51:31 2015 -0500
@@ -0,0 +1,37 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="bzlib" version="1.0.6">
+        <repository changeset_revision="d971aef661a7" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="boost" version="1.57">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://sourceforge.net/projects/boost/files/boost/1.57.0/boost_1_57_0.tar.gz</action>
+
+                <!-- populate the environment variables from the dependend repos -->
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="d971aef661a7" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="bzlib" version="1.0.6" />
+                    </repository>
+                </action>
+
+                <action type="shell_command">./bootstrap.sh</action>
+                <!-- try to set the right architecture with uname -m -->
+                <action type="shell_command">
+                    ./bjam address-model=64 cflags=-fPIC cxxflags=-fPIC install --prefix=$INSTALL_DIR/boost/ -sBZIP2_INCLUDE=$BZLIB_INCLUDE_DIR -sBZIP2_LIB=$BZLIB_LIB_DIR -sBZIP2_SOURCE=$BZLIB_SOURCE_DIR;
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="set_to" name="BOOST_ROOT_DIR">$INSTALL_DIR/boost</environment_variable>
+                    <environment_variable action="append_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/boost/lib/</environment_variable>
+                    <environment_variable action="prepend_to" name="CPLUS_INCLUDE_PATH">$INSTALL_DIR/boost/include</environment_variable>
+                    <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/boost/include</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+        Compiling boost requires a C++ compiler (typically gcc).
+        You can access the boost root directory through the $BOOST_ROOT_DIR system variable. All modules will be build.
+        Development of that wrapper happens in https://github.com/bgruening/galaxytools/.
+        </readme>
+    </package>
+</tool_dependency>