view einfo.xml @ 7:6d4fb70303b0 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit db33413a06c275efd4cc8e771c37facf543a2cfa"

<?xml version="1.0"?>
<tool id="ncbi_eutils_einfo" name="NCBI EInfo" version="@WRAPPER_VERSION@" profile="@PROFILE@">
  <description>fetch NCBI database metadata</description>
  <macros>
    <import>macros.xml</import>
  </macros>
  <expand macro="requirements"/>
  <version_command>python einfo.py --version</version_command>
  <command detect_errors="aggressive"><![CDATA[
python '$__tool_directory__/einfo.py'
--db $db_select

@EMAIL_ARGUMENTS@
> $default]]></command>
  <inputs>
    <expand macro="dbselect"/>
  </inputs>
  <outputs>
    <data format="xml" name="default" label="NCBI Database Information: $db_select"/>
  </outputs>
  <tests>
    <test>
      <param name="db_select" value="pubmed"/>
      <output name="default" file="pubmed.metadata.xml" compare="contains" ftype="xml"/>
    </test>
  </tests>
  <help><![CDATA[
NCBI Entrez EInfo
=================

Provides the number of records indexed in each field of a given database, the
date of the last update of the database, and the available links from the
database to other Entrez databases.

@REFERENCES@

@DISCLAIMER@
      ]]></help>
  <expand macro="citations"/>
</tool>