# HG changeset patch # User iuc # Date 1510943208 18000 # Node ID fb44dede6db8cf17e7850319ab91880e3b57bb3d # Parent 2ae61e6168d40a0053988676d1a8e0ee81d51a1c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 4a9e5506db1a6b93486b617162e1b59abcdd0f1b diff -r 2ae61e6168d4 -r fb44dede6db8 multiqc.xml --- a/multiqc.xml Thu Nov 16 05:17:49 2017 -0500 +++ b/multiqc.xml Fri Nov 17 13:26:48 2017 -0500 @@ -279,11 +279,11 @@ mkdir $repeat_dir && #if str($repeat2.type.type) == "log" #for $file in $repeat2.type.input - ln -s '$file' '${repeat_dir}/{$file.element_identifier}_Log.final.out' && + ln -s '$file' '${repeat_dir}/${file.element_identifier}_Log.final.out' && #end for #elif str($repeat2.type.type) == "genecounts" #for $file in $repeat2.type.input - ln -s '$file' '${repeat_dir}/{$file.element_identifier}_ReadsPerGene.out.tab' && + ln -s '$file' '${repeat_dir}/${file.element_identifier}_ReadsPerGene.out.tab' && #end for #end if #end for @@ -300,19 +300,19 @@ mkdir $file_dir && #if str($repeat2.type.type) == "relatedness2" #for $file in $repeat2.type.input - ln -s '$file' '${repeat_dir}/{$file.element_identifier}.relatedness2' && + ln -s '$file' '${repeat_dir}/${file.element_identifier}.relatedness2' && #end for #elif str($repeat2.type) == "tstv_by_count" #for $file in $repeat2.type.input - ln -s '$file' '${repeat_dir}/{$file.element_identifier}.TsTv.count' && + ln -s '$file' '${repeat_dir}/${file.element_identifier}.TsTv.count' && #end for #elif str($repeat2.type) == "tstv_by_qual" #for $file in $repeat2.type.input - ln -s '$file' '${repeat_dir}/{$file.element_identifier}.TsTv.qual' && + ln -s '$file' '${repeat_dir}/${file.element_identifier}.TsTv.qual' && #end for #elif str($repeat2.type) == "tstv_summary" #for $file in $repeat2.type.input - ln -s '$file' '${repeat_dir}/{$file.element_identifier}.TsTv.summary' && + ln -s '$file' '${repeat_dir}/${file.element_identifier}.TsTv.summary' && #end for #end if #end for