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1 ===============================================================
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2 Collection of Galaxy Datatypes for Multiple Sequence Alignments
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3 ===============================================================
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4
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5 That repository should be a starting point to collect all Multiple Sequence Alignment (MSA)
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6 file formats.
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7 Development will happen in https://github.com/bgruening/galaxytools. Feel free to contribute.
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8
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9 Copyright 2013 by:
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10
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11 * Bjoern Gruening
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12
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13
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14 ============
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15 Installation
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16 ============
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17
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18 Please install these datatypes with the Galaxy Tool Shed:
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19
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20 ==================
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21 Included Datatypes
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22 ==================
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23
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24 - Stockholm*
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25 - MSF
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26 - phylib
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27 - vienna
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28 - selex
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29 - clustal
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30
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31 (*) with split/merge and counting functions
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32
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33
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34 =======
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35 History
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36 =======
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37
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38 - v1.1.0: Initial public release
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39
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40
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41
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42
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43 ===============================
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44 Wrapper Licence (MIT/BSD style)
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45 ===============================
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46
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47 Permission to use, copy, modify, and distribute this software and its
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48 documentation with or without modifications and for any purpose and
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49 without fee is hereby granted, provided that any copyright notices
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50 appear in all copies and that both those copyright notices and this
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51 permission notice appear in supporting documentation, and that the
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52 names of the contributors or copyright holders not be used in
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53 advertising or publicity pertaining to distribution of the software
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54 without specific prior permission.
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55
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56 THE CONTRIBUTORS AND COPYRIGHT HOLDERS OF THIS SOFTWARE DISCLAIM ALL
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57 WARRANTIES WITH REGARD TO THIS SOFTWARE, INCLUDING ALL IMPLIED
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58 WARRANTIES OF MERCHANTABILITY AND FITNESS, IN NO EVENT SHALL THE
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59 CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY SPECIAL, INDIRECT
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60 OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS
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61 OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE
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62 OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE
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63 OR PERFORMANCE OF THIS SOFTWARE.
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64
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