# HG changeset patch
# User iuc
# Date 1533318573 14400
# Node ID bd9107a27c63c5d9dd96b252ea28d21a325af81f
# Parent  d444ba36712cf0273b6160a388e968054d10e746
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 7f7605c2c8d8e92f3369dfdc290e5d8d06fa409a

diff -r d444ba36712c -r bd9107a27c63 macros.xml
--- a/macros.xml	Sat Jul 14 22:15:04 2018 -0400
+++ b/macros.xml	Fri Aug 03 13:49:33 2018 -0400
@@ -243,4 +243,23 @@
             <yield/>
         </citations>
     </xml>
+    <xml name="citations-ecology">
+        <citation type="bibtex">
+            @book{mccune2002analysis,
+              title={Analysis of ecological communities},
+              author={McCune, Bruce and Grace, James B and Urban, Dean L},
+              volume={28},
+              year={2002},
+              publisher={MjM software design Gleneden Beach, OR}
+            }
+        </citation>
+        <citation type="bibtex">
+            @misc{legendre1998numerical,
+              title={Numerical Ecology, Volume 24, (Developments in Environmental Modelling)},
+              author={Legendre, Pierre and Legendre, Louis},
+              year={1998},
+              publisher={Elsevier Science Amsterdam, The Netherlands}
+            }
+        </citation>
+    </xml>
 </macros>
diff -r d444ba36712c -r bd9107a27c63 parsimony.xml
--- a/parsimony.xml	Sat Jul 14 22:15:04 2018 -0400
+++ b/parsimony.xml	Fri Aug 03 13:49:33 2018 -0400
@@ -89,5 +89,32 @@
 v.1.20.0: Added count parameter
 
     ]]></help>
-    <expand macro="citations"/>
+    <expand macro="citations">
+        <citation type="bibtex">
+@article{slatkin1989cladistic,
+  title={A cladistic measure of gene flow inferred from the phylogenies of alleles.},
+  author={Slatkin, Montgomery and Maddison, Wayne P},
+  journal={Genetics},
+  volume={123},
+  number={3},
+  pages={603--613},
+  year={1989},
+  publisher={Genetics Soc America}
+}
+        </citation>
+        <citation type="bibtex">
+@article{slatkin1990detecting,
+  title={Detecting isolation by distance using phylogenies of genes.},
+  author={Slatkin, Montgomery and Maddison, Wayne P},
+  journal={Genetics},
+  volume={126},
+  number={1},
+  pages={249--260},
+  year={1990},
+  publisher={Genetics Soc America}
+}
+        </citation>
+        <citation type="doi">10.1128/AEM.68.8.3673-3682.2002</citation>
+        <citation type="doi">10.1128/AEM.72.4.2379-2384.2006</citation>
+    </expand>
 </tool>