# HG changeset patch # User iuc # Date 1510924286 18000 # Node ID 8cc404188faefe1e43d98cea879cfb347d52bef5 # Parent e738fb9d4a22cfdedc6a0c5395d6150774a6933a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/minimap2 commit 1672eb3642d19c8502322115b86846297cd5a6b0 diff -r e738fb9d4a22 -r 8cc404188fae minimap2.xml --- a/minimap2.xml Wed Nov 08 12:19:49 2017 -0500 +++ b/minimap2.xml Fri Nov 17 08:11:26 2017 -0500 @@ -1,8 +1,8 @@ - + A fast pairwise aligner for genomic and spliced nucleotide sequences - minimap2 + minimap2 samtools minimap2 --version @@ -89,6 +89,7 @@ #if $io_options.cs: --cs $io_options.cs #end if + $io_options.Y #if $io_options.K: -K $io_options.K #end if @@ -211,6 +212,7 @@ + diff -r e738fb9d4a22 -r 8cc404188fae test-data/minimap2-test1-fasta.bam Binary file test-data/minimap2-test1-fasta.bam has changed diff -r e738fb9d4a22 -r 8cc404188fae test-data/minimap2-test1-fasta.cram Binary file test-data/minimap2-test1-fasta.cram has changed diff -r e738fb9d4a22 -r 8cc404188fae test-data/minimap2-test1.bam Binary file test-data/minimap2-test1.bam has changed diff -r e738fb9d4a22 -r 8cc404188fae test-data/minimap2-test2.bam Binary file test-data/minimap2-test2.bam has changed