# HG changeset patch
# User iuc
# Date 1616146825 0
# Node ID 0969cc2ddf5f89a6434d28ae4956a0d78846aa7c
# Parent  f25bf202bc1799a5af30dd830a70d3ca954b347a
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/minimap2 commit 9eebe4bec24764deefcf7005abd588be29f4594f"

diff -r f25bf202bc17 -r 0969cc2ddf5f minimap2.xml
--- a/minimap2.xml	Thu Feb 11 19:10:13 2021 +0000
+++ b/minimap2.xml	Fri Mar 19 09:40:25 2021 +0000
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
-<tool id="minimap2" name="Map with minimap2" version="@TOOL_VERSION@+galaxy3" profile="17.01">
+<tool id="minimap2" name="Map with minimap2" version="@TOOL_VERSION@+galaxy4" profile="17.01">
     <description>A fast pairwise aligner for genomic and spliced nucleotide sequences</description>
     <macros>
         <token name="@TOOL_VERSION@">2.17</token>
@@ -167,8 +167,9 @@
         --reference reference.fa
         --output-fmt-option no_ref
         -o '$alignment_output'
+    #else:
+        > '$alignment_output'
     #end if
-    > '$alignment_output'
 ]]>
     </command>
     <inputs>