diff macs2_predictd.xml @ 27:16545befe8b5 draft

Uploaded

--- a/macs2_predictd.xml	Fri Sep 19 13:43:11 2014 -0400
+++ b/macs2_predictd.xml	Thu Jan 08 13:39:36 2015 -0500
@@ -1,4 +1,4 @@
-<tool id="macs2_predictd" name="MACS2 predictd" version="2.0.10.0">
+<tool id="macs2_predictd" name="MACS2 predictd" version="@VERSION_STRING@.0">
     <description>Predict 'd' or fragment size from alignment results</description>
     <expand macro="requirements">
         <requirement type="package" version="3.0.1">R_3_0_1</requirement>
@@ -46,13 +46,14 @@
     <tests>
         <test>
             <param name="infiles" value="Control_200K.bed,ChIP_200K.bed" ftype="bed" />
-            <param name="effective_genome_size_options_selector" value="3300000000" />
+            <param name="effective_genome_size_options_selector" value="user_defined" />
+            <param name="gsize" value="3300000000" />
             <param name="tsize" value="-1.0"/>
             <param name="band_width" value="300"/>
             <param name="mfoldlo" value="5"/>
             <param name="mfoldhi" value="50"/>
             <output name="outfile" file="predictd_on_ChIP_200K_and_Control_200K.txt"/>
-            <output name="outfile_image" file="predictd_on_ChIP_200K_and_Control_200K.pdf" lines_diff="5"/>
+            <output name="outfile_image" file="predictd_on_ChIP_200K_and_Control_200K.pdf" compare="sim_size"/>
         </test>
     </tests>
     <help>