comparison tool_dependencies.xml @ 12:836578426f44 draft

Uploaded
author bgruening
date Fri, 24 Jan 2014 10:35:51 -0500
parents ac24388a0fda
children b680eea82cf3
comparison
equal deleted inserted replaced
11:ac24388a0fda 12:836578426f44
10 <repository changeset_revision="1d5b86c2e93d" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="1d5b86c2e93d" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <set_environment version="1.0"> 12 <set_environment version="1.0">
13 <environment_variable action="set_to" name="MACS2_SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable> 13 <environment_variable action="set_to" name="MACS2_SCRIPT_PATH">$REPOSITORY_INSTALL_DIR</environment_variable>
14 </set_environment> 14 </set_environment>
15 <package name="macs2" version="2.0.10.2"> 15 <!-- 2.0.10 12162013 -->
16 <package name="macs2" version="2.0.10.3">
16 <install version="1.0"> 17 <install version="1.0">
17 <actions> 18 <actions>
18 <action type="download_by_url">https://pypi.python.org/packages/source/M/MACS2/MACS2-2.0.10.07132012.tar.gz</action> 19 <action type="shell_command">git clone --recursive https://github.com/taoliu/MACS.git</action>
20 <action type="shell_command">git checkout 7ccb571d2f2dcb5be1d75f323b1d17a59b926deb</action>
21 <action type="shell_command">git submodule update --recursive</action>
22
19 <action type="set_environment_for_install"> 23 <action type="set_environment_for_install">
20 <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu"> 24 <repository changeset_revision="84125ffacb90" name="package_numpy_1_7" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
21 <package name="numpy" version="1.7.1" /> 25 <package name="numpy" version="1.7.1" />
22 </repository> 26 </repository>
23 <repository changeset_revision="4b2ef8519550" name="package_scipy_0_12" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu"> 27 <repository changeset_revision="4b2ef8519550" name="package_scipy_0_12" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">