Mercurial > repos > iuc > kmer2stats
diff test-data/compute_diversity.csv @ 0:a926baa751bf draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/kmer2stats/ commit bd206c6d73970ab185b1c2afe9c1371c96304ba2
| author | iuc |
|---|---|
| date | Wed, 16 Apr 2025 09:35:15 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/compute_diversity.csv Wed Apr 16 09:35:15 2025 +0000 @@ -0,0 +1,40 @@ +Metric Value +shannon 3.0008343481203097 +simpson_d 0.05166872360281036 +pielou_e 0.9856502651904311 +berger_parker_d 0.07767084954319868 +doubles 0.0 +chao1 21.0 +ace 21.0 +margalef 1.7333706667578765 +menhinick 0.06557347078942946 +observed_features 21.0 +singles 0.0 +brillouin_d 2.9998465804117767 +enspie 19.354068191953715 +fisher_alpha 1.9300228892270015 +hill 19.354068191953715 +inv_simpson 19.354068191953715 +kempton_taylor_q 23.554232087804213 +renyi 2.9629026398561664 +tsallis 0.9483312763971896 +heip_e 0.9551151123125123 +mcintosh_e 0.227351887637374 +simpson_e 0.9216222948549389 +dominance 0.05166872360281036 +gini_index 0.11703464744094205 +mcintosh_d 0.7751127725699819 +strong 0.12213080159960554 +goods_coverage 1.0 +robbins 0.0 +total_count 102561.0 +unique_kmers 21.0 +mean_count 4883.857142857143 +median_count 5078.0 +max_count 7966.0 +min_count 2469.0 +std_count 1424.2385529756991 +count_range 5497.0 +num_singletons 0.0 +num_doubletons 0.0 +percent_singletons 0.0