diff jython_script.py @ 6:74b6dd718fef draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 8ea6a4271431c05c82b09c0d3e629b13e6ea7936
author iuc
date Fri, 22 Jul 2016 23:12:05 -0400
parents e16d8e6654a6
children
line wrap: on
line diff
--- a/jython_script.py	Sun Oct 11 13:30:37 2015 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,14 +0,0 @@
-import sys
-from ij import IJ
-
-# Fiji Jython interpreter implements Python 2.5 which does not
-# provide support for argparse.
-title = sys.argv[ -6 ]
-width = int( sys.argv[ -5 ] )
-height = int( sys.argv[ -4 ] )
-depth = int( sys.argv[ -3 ] )
-type = sys.argv[ -2 ].replace( '_', ' ' )
-tmp_image_path = sys.argv[ -1 ]
-
-imp = IJ.newImage( title, type, width, height, depth )
-IJ.save( imp, "%s" % tmp_image_path )