Mercurial > repos > iuc > imagej2_create_image
diff jython_script.py @ 0:dfe318d97378 draft
planemo upload commit 4bf97847c35c4dcf9638008b9b4b6c4e10015f19
| author | iuc |
|---|---|
| date | Tue, 09 Jun 2015 12:22:03 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/jython_script.py Tue Jun 09 12:22:03 2015 -0400 @@ -0,0 +1,14 @@ +import sys +from ij import IJ + +# Fiji Jython interpreter implements Python 2.5 which does not +# provide support for argparse. +title = sys.argv[ -6 ] +width = int( sys.argv[ -5 ] ) +height = int( sys.argv[ -4 ] ) +depth = int( sys.argv[ -3 ] ) +type = sys.argv[ -2 ].replace( '_', ' ' ) +tmp_image_path = sys.argv[ -1 ] + +imp = IJ.newImage( title, type, width, height, depth ) +IJ.save( imp, "%s" % tmp_image_path )
