diff imagej2_convert_format.py @ 4:7a8b05b111f9 draft

planemo upload commit 18df9e67efd4adafcde4eb9b62cd815e4afe9733-dirty

--- a/imagej2_convert_format.py	Tue Aug 04 11:15:04 2015 -0400
+++ b/imagej2_convert_format.py	Wed Aug 26 14:37:12 2015 -0400
@@ -8,15 +8,12 @@
     parser = argparse.ArgumentParser()
     parser.add_argument( '--in_fname', dest='in_fname', help='Path to the input file' )
     parser.add_argument( '--input_datatype', dest='input_datatype', help='Input image datatype' )
-    parser.add_argument( '--max_heap_size_type', dest='max_heap_size_type', help='Type (default or megabytes) of max_heap_size value' )
-    parser.add_argument( '--max_heap_size', dest='max_heap_size', help='Maximum size of the memory allocation pool used by the JVM.' )
     parser.add_argument( '--output_datatype', dest='output_datatype', help='Output image datatype' )
     parser.add_argument( '--out_fname', help='Path to the output file' )
     args = parser.parse_args()
-    # Set the size of the memory allocation pool used by the JVM.
-    max_heap_size = imagej2_base_utils.get_max_heap_size_value( args.max_heap_size_type, args.max_heap_size )
+
     # Start the JVM via the Javabridge.
-    imagej2_utils.start_vm( args=None, class_path=None, max_heap_size=max_heap_size, run_headless=True )
+    imagej2_utils.start_vm( args=None, class_path=None, max_heap_size=None, run_headless=True )
     try:
         tmp_dir = imagej2_base_utils.get_temp_dir()
         in_image_path = imagej2_base_utils.get_input_image_path( tmp_dir, args.in_fname, args.input_datatype )