Mercurial > repos > iuc > hmmer_hmmbuild

diff TODO.md @ 0:648d9e133324 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 86a44bf15f8184b690ee1af98aa1d5f86ad2fb3d-dirty
author: iuc
date: Fri, 02 Oct 2015 13:40:09 -0400
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/TODO.md	Fri Oct 02 13:40:09 2015 -0400
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+# Necessary
+
+- output names on `$(grep tblout *.xml)`
+- Help text
+- HmmPress datatypes
+- Publicly available hmm databases? data manager needed? Locally installed, etc?
+- Use hmmpress databases in History/Locally Cached/etc
+
+# Programs
+
+- hmmstat
+- hmmsim
+- hmmc2
+- hmmlogo +skylign
+
+Easel toolkit
+
+- esl-afetch
+- esl-alimanip
+- esl-alimap
+- esl-alimask
+- esl-alimerge
+- esl-alipid
+- esl-alistat
+- esl-cluster
+- esl-compalign
+- esl-compstruct
+- esl-construct
+- esl-histplot
+- esl-mask
+- esl-reformat
+- esl-selectn
+- esl-seqrange
+- esl-seqstat
+- esl-sfetch
+- esl-shuffle
+- esl-ssdraw
+- esl-stranslate
+- esl-weight