# HG changeset patch
# User iuc
# Date 1630399023 0
# Node ID 11385d22701464ca359fca56b489a360d243c949
# Parent 7c973114210510f492c4a7fbc27ab8ab4a684c95
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/goseq commit e0d4688a59e6eeba33adcfe803ac43d0bc2863e7"
diff -r 7c9731142105 -r 11385d227014 goseq.xml
--- a/goseq.xml Sun Jun 06 22:47:03 2021 +0000
+++ b/goseq.xml Tue Aug 31 08:37:03 2021 +0000
@@ -523,4 +523,4 @@
10.1186/gb-2010-11-2-r14
-
\ No newline at end of file
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diff -r 7c9731142105 -r 11385d227014 goseq.xml.orig
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/goseq.xml.orig Tue Aug 31 08:37:03 2021 +0000
@@ -0,0 +1,531 @@
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+ tests for overrepresented gene categories
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+<<<<<<< HEAD
+ goseq
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+ topic_3308
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+ operation_2436
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+=======
+ goseq
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+>>>>>>> c37d72558 (add more bio.tool IDs)
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+ 1.44.0
+ galaxy0
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+ bioconductor-goseq
+ bioconductor-org.hs.eg.db
+ bioconductor-org.dm.eg.db
+ bioconductor-org.dr.eg.db
+ bioconductor-org.mm.eg.db
+ r-dplyr
+ r-ggplot2
+ r-optparse
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+ /dev/null | grep -v -i "WARNING: ")", optparse version" $(R --vanilla --slave -e "library(optparse); cat(sessionInfo()\$otherPkgs\$optparse\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Hs.eg.db version" $(R --vanilla --slave -e "library(org.Hs.eg.db); cat(sessionInfo()\$otherPkgs\$org.Hs.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dr.eg.db version" $(R --vanilla --slave -e "library(org.Dr.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dr.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Dm.eg.db version" $(R --vanilla --slave -e "library(org.Dm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Dm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", org.Mm.eg.db version" $(R --vanilla --slave -e "library(org.Mm.eg.db); cat(sessionInfo()\$otherPkgs\$org.Mm.eg.db\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", dplyr version" $(R --vanilla --slave -e "library(dplyr); cat(sessionInfo()\$otherPkgs\$dplyr\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", ggplot2 version" $(R --vanilla --slave -e "library(ggplot2); cat(sessionInfo()\$otherPkgs\$ggplot2\$Version)" 2> /dev/null | grep -v -i "WARNING: ")
+ ]]>
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+ methods['wallenius']
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+ methods['repcnt'] != 0
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+ methods['hypergeometric']
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+ out['make_plots']
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+ methods['repcnt'] != 0
+ methods['wallenius']
+ out['make_plots']
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+ methods['wallenius']
+ out['topgo_plot']
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+ out['cat_genes']
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+ out['rdata_out']
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+ 10.1186/gb-2010-11-2-r14
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+
\ No newline at end of file