Mercurial > repos > iuc > ggplot2_heatmap
changeset 6:3f13d3158bf5 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 843a94f53c808d098def353b0bc5f7f554d9e1af
| author | iuc |
|---|---|
| date | Fri, 09 Dec 2022 22:39:41 +0000 |
| parents | f6f9f2ec14bc |
| children | 48fc850095ba |
| files | ggplot2_heatmap.xml macros.xml test-data/ggplot_histogram_result1.pdf test-data/ggplot_line_result1.pdf test-data/ggplot_pca_result1.pdf test-data/ggplot_point_result1.pdf test-data/ggplot_point_result2.pdf test-data/ggplot_point_result3.pdf test-data/ggplot_violin_result1.pdf |
| diffstat | 9 files changed, 27 insertions(+), 5 deletions(-) [+] |
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--- a/ggplot2_heatmap.xml Tue Nov 23 07:54:51 2021 +0000 +++ b/ggplot2_heatmap.xml Fri Dec 09 22:39:41 2022 +0000 @@ -6,10 +6,10 @@ <requirements> <requirement type="package" version="1.1.1">r-cowplot</requirement> <requirement type="package" version="0.4.5">r-egg</requirement> - <requirement type="package" version="0.1.22">r-ggdendro</requirement> - <requirement type="package" version="1.0.7">r-dplyr</requirement> + <requirement type="package" version="0.1.23">r-ggdendro</requirement> + <requirement type="package" version="1.0.10">r-dplyr</requirement> <requirement type="package" version="1.4.4">r-reshape2</requirement> - <requirement type="package" version="2.0.0">r-svglite</requirement> + <requirement type="package" version="2.1.0">r-svglite</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ cat '$script' &&
--- a/macros.xml Tue Nov 23 07:54:51 2021 +0000 +++ b/macros.xml Fri Dec 09 22:39:41 2022 +0000 @@ -12,10 +12,9 @@ <xref type="bio.tools">ggplot2</xref> </xrefs> </xml> - <token name="@TOOL_VERSION@">3.3.5</token> + <token name="@TOOL_VERSION@">3.4.0</token> <token name="@VERSION_SUFFIX@">0</token> - <token name="@R_INIT@"><![CDATA[ ## Setup R error handling to go to stderr options(show.error.messages=F, error=function(){cat(geterrmessage(), file=stderr()); q("no",1,F)}) @@ -318,6 +317,29 @@ <option value="grey">Grey</option> <option value="gold">Gold</option> </param> + <param name="shape" type="select" label="Shape of data points" > + <option value="0">square</option> + <option value="1">circle</option> + <option value="2">triangle point up</option> + <option value="3">plus</option> + <option value="4">cross</option> + <option value="5">diamond</option> + <option value="6">triangle point down</option> + <option value="7">square cross</option> + <option value="8">star</option> + <option value="9">diamond plus</option> + <option value="10">circle plus</option> + <option value="11">triangles up and down</option> + <option value="12">square plus</option> + <option value="13">circle cross</option> + <option value="14">square and triangle down</option> + <option value="15">filled square</option> + <option value="16">filled circle</option> + <option value="17">filled triangle point-up</option> + <option value="18">filled diamond</option> + <option value="19">solid circle</option> + <option value="20">bullet (smaller circle)</option> + </param> </when> </conditional> </xml>