# HG changeset patch
# User iuc
# Date 1630397564 0
# Node ID d4fcc32b787713e0503e152c41274ecabc998ac5
# Parent  0288f39941a7a9e084e38eb46e95001315286687
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit e0d4688a59e6eeba33adcfe803ac43d0bc2863e7"

diff -r 0288f39941a7 -r d4fcc32b7877 gemini_actionable_mutations.xml
--- a/gemini_actionable_mutations.xml	Tue Mar 10 10:07:25 2020 +0000
+++ b/gemini_actionable_mutations.xml	Tue Aug 31 08:12:44 2021 +0000
@@ -1,5 +1,6 @@
 <tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@">
     <description>Retrieve genes with actionable somatic mutations via COSMIC and DGIdb</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>gemini_macros.xml</import>
         <token name="@BINARY@">actionable_mutations</token>
diff -r 0288f39941a7 -r d4fcc32b7877 gemini_macros.xml
--- a/gemini_macros.xml	Tue Mar 10 10:07:25 2020 +0000
+++ b/gemini_macros.xml	Tue Aug 31 08:12:44 2021 +0000
@@ -4,6 +4,12 @@
     <!-- minimal annotation files version required by this version of gemini -->
     <token name="@DB_VERSION@">200</token>
 
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">gemini</xref>
+        </xrefs>
+    </xml>
+
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@VERSION@">gemini</requirement>
diff -r 0288f39941a7 -r d4fcc32b7877 repository_dependencies.xml
--- a/repository_dependencies.xml	Tue Mar 10 10:07:25 2020 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,4 +0,0 @@
-<?xml version="1.0" ?>
-<repositories description="This requires the GEMINI data manager definition to install all required annotation databases.">
-    <repository changeset_revision="578b6fcc36e1" name="data_manager_gemini_database_downloader" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"/>
-</repositories>
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