diff gemini_windower.xml @ 17:65f742e605ec draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 344140b8df53b8b7024618bb04594607a045c03a

--- a/gemini_windower.xml	Tue Apr 28 22:55:56 2015 -0400
+++ b/gemini_windower.xml	Mon May 04 22:46:38 2015 -0400
@@ -1,11 +1,12 @@
 <tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0">
     <description>Conducting analyses on genome "windows"</description>
-    <expand macro="requirements" />
-    <expand macro="version_command" />
     <macros>
         <import>gemini_macros.xml</import>
         <token name="@BINARY@">windower</token>
     </macros>
+    <expand macro="requirements" />
+    <expand macro="stdio" />
+    <expand macro="version_command" />
     <command>
 <![CDATA[
         gemini @BINARY@
@@ -17,7 +18,6 @@
             > "${ outfile }"
 ]]>
     </command>
-    <expand macro="stdio" />
     <inputs>
         <expand macro="infile" />
 
@@ -34,12 +34,12 @@
             <option value="collapse">collapse</option>
         </param>
 
-        <param name="w" type="integer" value="10000" size="10" label="The window size in bp" 
+        <param name="w" type="integer" value="10000" size="10" label="The window size in bp"
             help="(-w)">
             <validator type="in_range" min="0"/>
         </param>
 
-        <param name="s" type="integer" value="1000" size="10" label="The step size for the windows in bp" 
+        <param name="s" type="integer" value="1000" size="10" label="The step size for the windows in bp"
             help="(-s)">
             <validator type="in_range" min="0"/>
         </param>