Mercurial > repos > iuc > flair_collapse
comparison flair_collapse.xml @ 2:2454ab2d95ce draft default tip
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/flair commit 116d8aa50dda2eb771b71fa5e3ed8f0f35e2821c"
| author | iuc |
|---|---|
| date | Sat, 27 Nov 2021 09:36:36 +0000 |
| parents | e3fca040d79d |
| children |
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| 1:e3fca040d79d | 2:2454ab2d95ce |
|---|---|
| 1 <tool id="flair_collapse" name="FLAIR collapse" version="@TOOL_VERSION@+galaxy0" profile="20.01"> | 1 <tool id="flair_collapse" name="FLAIR collapse" version="@TOOL_VERSION@+galaxy1" profile="20.01"> |
| 2 <description>defines high-confidence isoforms from flair-corrected reads</description> | 2 <description>defines high-confidence isoforms from flair-corrected reads</description> |
| 3 | 3 |
| 4 <macros> | 4 <macros> |
| 5 <import>flair_macros.xml</import> | 5 <import>flair_macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 46 $additional_options.trustends | 46 $additional_options.trustends |
| 47 | 47 |
| 48 #if str($additional_options.select_filter): | 48 #if str($additional_options.select_filter): |
| 49 -e str($additional_options.select_filter) | 49 -e str($additional_options.select_filter) |
| 50 #end if | 50 #end if |
| 51 | 51 --quality $additional_options.mapq |
| 52 ######### | 52 ######### |
| 53 ## END ## | 53 ## END ## |
| 54 ######### | 54 ######### |
| 55 | 55 |
| 56 ]]></command> | 56 ]]></command> |