Mercurial > repos > iuc > fastq_screen

changeset 1:3480daf4ed27 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iuc
date Fri, 16 May 2014 19:26:18 -0400
parents 8a8adbf98ecc
children 81a0c1c27ec8
files fastq_screen.xml tool_dependencies.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/fastq_screen.xml	Fri May 16 07:57:33 2014 -0400
+++ b/fastq_screen.xml	Fri May 16 19:26:18 2014 -0400
@@ -2,7 +2,7 @@
     <description>Screen for contamination</description>
     <requirements>
         <requirement type="package" version="0.4.2">fastq_screen</requirement>
-        <requirement type="package" version="2.1.0">bowtie2</requirement>
+        <requirement type="package" version="2.1.0">package_bowtie2</requirement>
     </requirements>
     <command> 
     fastq_screen --aligner="bowtie2" --outdir="." --conf="$fastqrunconf"
--- a/tool_dependencies.xml	Fri May 16 07:57:33 2014 -0400
+++ b/tool_dependencies.xml	Fri May 16 19:26:18 2014 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
-    <package name="bowtie2" version="2.1.0">
+    <package name="package_bowtie2" version="2.1.0">
         <repository changeset_revision="606d435a57a4" name="package_bowtie2_2_1_0" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="fastq_screen" version="0.4.2">