Mercurial > repos > iuc > fastk_histex
comparison histex.xml @ 3:407b6b91b845 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastk commit 64d29a89de7b928abec794a8d34c010724ae0fb3
| author | iuc |
|---|---|
| date | Fri, 07 Mar 2025 09:43:33 +0000 |
| parents | c0bcbd03d352 |
| children |
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| 2:7708a9509994 | 3:407b6b91b845 |
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| 1 <tool id="fastk_histex" name="FastK Histex" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.2" license="MIT"> | 1 <tool id="fastk_histex" name="FastK Histex" version="@TOOL_VERSION@+galaxy3" profile="23.2" license="MIT"> |
| 2 <description>Reads and displays a kmer histogram produced by FastK</description> | 2 <description>Reads and displays a kmer histogram produced by FastK</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="xrefs"/> | 6 <expand macro="xrefs"/> |
| 23 <option value="-G">Output an ASCII format histogram especially for GeneScope.FK (-G)</option> | 23 <option value="-G">Output an ASCII format histogram especially for GeneScope.FK (-G)</option> |
| 24 </param> | 24 </param> |
| 25 </inputs> | 25 </inputs> |
| 26 <outputs> | 26 <outputs> |
| 27 <data name="histex_out" format="txt" from_work_dir="output.hist" label="${tool.name} on ${on_string}: FastK Histogram Text"> | 27 <data name="histex_out" format="txt" from_work_dir="output.hist" label="${tool.name} on ${on_string}: FastK Histogram Text"> |
| 28 <filter>select_output_format != '-A' </filter> | 28 <filter>select_output_format == '-k' </filter> |
| 29 </data> | 29 </data> |
| 30 <data name="histex_out_tsv" format="tabular" from_work_dir="output.hist" label="${tool.name} on ${on_string}: FastK Histogram TSV"> | 30 <data name="histex_out_tsv" format="tabular" from_work_dir="output.hist" label="${tool.name} on ${on_string}: FastK Histogram TSV"> |
| 31 <filter> select_output_format == '-A'</filter> | 31 <filter> select_output_format != '-k'</filter> |
| 32 </data> | 32 </data> |
| 33 </outputs> | 33 </outputs> |
| 34 <tests> | 34 <tests> |
| 35 <test expect_num_outputs="1"> | 35 <test expect_num_outputs="1"> |
| 36 <param name="input_hist" value="test01.hist"/> | 36 <param name="input_hist" value="test01.hist"/> |