Mercurial > repos > iuc > exonerate

annotate test-data/est2genome.gff3 @ 4:37f3a8c3c694 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e0d4688a59e6eeba33adcfe803ac43d0bc2863e7"
author iuc
date Tue, 31 Aug 2021 08:06:32 +0000
parents 0d6a5769f901
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
1 ##gff-version 3
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
2 sample exonerate:est2genome gene 2742 2819 102 - . ID=gene_1;gene_id=1;identity=58.97;sequence=sample;similarity=58.97
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
3 sample exonerate:est2genome mRNA 2742 2819 . - . ID=mRNA_1;Parent=gene_1
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
4 sample exonerate:est2genome exon 2742 2819 . - . ID=mRNA_1_exon_1;Parent=mRNA_1;deletions=0;identity=58.97;insertions=0;similarity=58.97
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
5 sample exonerate:est2genome CDS 2742 2819 . - 0 ID=mRNA_1_CDS;Parent=mRNA_1
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
6 sample exonerate:est2genome gene 758 3050 7309 + . ID=gene_2;gene_id=1;identity=99.93;sequence=sample;similarity=99.93
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
7 sample exonerate:est2genome mRNA 758 3050 . + . ID=mRNA_2;Parent=gene_2
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
8 sample exonerate:est2genome five_prime_UTR 758 1332 . + . ID=mRNA_2_five_prime_UTR;Parent=mRNA_2
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
9 sample exonerate:est2genome exon 758 1332 . + . ID=mRNA_2_exon_1;Parent=mRNA_2;deletions=2;identity=99.83;insertions=0;similarity=99.83
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
10 sample exonerate:est2genome exon 2152 3050 . + . ID=mRNA_2_exon_2;Parent=mRNA_2;deletions=0;identity=100.00;insertions=0;similarity=100.00
0d6a5769f901 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
11 sample exonerate:est2genome CDS 2152 3050 . + 0 ID=mRNA_2_CDS;Parent=mRNA_2