comparison deseq2.xml @ 12:69b7590cb486 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit e5a5ad091c621348dc6ce2df861475ebc54a380e

11:c7726b3c7a5e

<tool id="deseq2" name="DESeq2" version="2.1.8.0">
    <description>Determines differentially expressed features from count tables</description>
    <requirements>
        <!-- odering is crucial, otherwise R will override the ENV variables from deseq2 -->
        <requirement type="package" version="1.8.1">deseq2</requirement>
    </requirements>
    <stdio>
        <regex match="Execution halted"
           source="both"
           level="fatal"

12:69b7590cb486

<tool id="deseq2" name="DESeq2" version="2.1.8.2">
    <description>Determines differentially expressed features from count tables</description>
    <requirements>
        <!-- odering is crucial, otherwise R will override the ENV variables from deseq2 -->
        <requirement type="package" version="1.8.2">deseq2</requirement>
    </requirements>
    <stdio>
        <regex match="Execution halted"
           source="both"
           level="fatal"