comparison datamash-transpose.xml @ 10:3dcdff1ab5ac draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/datamash commit 178914e2f45c9d80bd4d88377c634593246b9f36

9:a1cdc32ea989

<tool id="datamash_transpose" name="Transpose" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
    <description>rows/columns in a tabular file</description>
    <macros>
        <import>macros.xml</import>
    </macros>
    <edam_topics>
        <edam_topic>topic_3570</edam_topic> <!-- Pure math / linear algebra -->
    </edam_topics>
    <edam_operations>

    </edam_operations>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
        #import os
        #set file_size_MB = os.path.getsize(str($in_file)) / (1024 * 1024)
        #set size_threshold_MB = 1024
        #if $file_size_MB <= $size_threshold_MB:
            datamash transpose @FIELD_SEPARATOR@ < $in_file > $out_file
        #else:
            ## Input matrix is very big: divide and conquer

10:3dcdff1ab5ac

<tool id="datamash_transpose" name="Transpose" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
    <description>rows/columns in a tabular file</description>
    <macros>
        <import>macros.xml</import>
        <token name="@VERSION_SUFFIX@">0</token>
    </macros>
    <edam_topics>
        <edam_topic>topic_3570</edam_topic> <!-- Pure math / linear algebra -->
    </edam_topics>
    <edam_operations>

    </edam_operations>
    <expand macro="requirements"/>
    <expand macro="stdio"/>
    <command><![CDATA[
        #import os
        #set file_size_MB = $in_file.get_size() / (1024 * 1024)
        #set size_threshold_MB = 1024
        #if $file_size_MB <= $size_threshold_MB:
            datamash transpose @FIELD_SEPARATOR@ < $in_file > $out_file
        #else:
            ## Input matrix is very big: divide and conquer