Mercurial > repos > iuc > data_manager_vep_cache_downloader
diff data_manager_conf.xml @ 0:9ae9c07fc6c6 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_vep_cache_downloader commit 2db33cd5bcf5e2d7e3a43f11855c4cfc3b1b9f56
| author | iuc |
|---|---|
| date | Wed, 11 May 2022 13:01:51 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data_manager_conf.xml Wed May 11 13:01:51 2022 +0000 @@ -0,0 +1,22 @@ +<?xml version="1.0"?> +<data_managers> + <data_manager tool_file="data_manager/data_manager_vep_cache_download.xml" id="data_manager_vep_cache_download" > + <data_table name="vep_versioned_annotation_cache"> <!-- Defines a Data Table to be modified. --> + <output> <!-- Handle the output of the Data Manager Tool --> + <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="version" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="cachetype" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="species" /> <!-- columns that are going to be specified by the Data Manager Tool --> + <column name="path" output_ref="out_file" > + <move type="directory" relativize_symlinks="True"> + <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">vep/${version}/${dbkey}/${cachetype}</target> + </move> + <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/vep/${version}/${dbkey}/${cachetype}/</value_translation> + <value_translation type="function">abspath</value_translation> + </column> + </output> + </data_table> + </data_manager> +</data_managers> \ No newline at end of file