diff tool_data_table_conf.xml.sample @ 1:20fae63ba8dc draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
author iuc
date Thu, 06 Apr 2023 16:16:17 +0000
parents 5d2e5fddec81
children
line wrap: on
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--- a/tool_data_table_conf.xml.sample	Sun Aug 08 10:57:48 2021 +0000
+++ b/tool_data_table_conf.xml.sample	Thu Apr 06 16:16:17 2023 +0000
@@ -1,12 +1,17 @@
 <tables>
+    <!-- Locations of preparsed genomes -->
+    <table name="homer_preparse" comment_char="#">
+        <columns>value, dbkey, mask, size, name, path, path_fasta, version</columns>
+        <file path="tool-data/homer_preparse.loc"/>
+    </table>
     <!-- Locations of all fasta files under genome directory -->
     <table name="all_fasta" comment_char="#">
         <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/all_fasta.loc" />
+        <file path="tool-data/all_fasta.loc"/>
     </table>
-    <!-- Locations of preparsed genomes -->
-    <table name="homer_preparse" comment_char="#">
-        <columns>value, dbkey, mask, size, name, path, path_fasta, version</columns>
-        <file path="tool-data/homer_preparse.loc" />
+    <!-- Built-in homer promoter and ID DBs (dir of <env>/share/data, 1 per organism) -->
+    <table name="homer_promoters" comment_char="#">
+        <columns>value, dbkey, organism, path, organism_version, promoter_version</columns>
+        <file path="tool-data/homer_promoters.loc"/>
     </table>
 </tables>