Mercurial > repos > iuc > data_manager_homer_preparse

annotate tool_data_table_conf.xml.test @ 2:648215734fa5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e6639e130c5bf50f489dd09e38a1cbc712280fff
author iuc
date Fri, 07 Apr 2023 14:55:37 +0000
parents 20fae63ba8dc
children
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5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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1 <tables>
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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2 <!-- Locations of preparsed genomes when running tests-->
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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3 <table name="homer_preparse" comment_char="#">
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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4 <columns>value, dbkey, mask, size, name, path, path_fasta, version</columns>
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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5 <file path="${__HERE__}/test-data/homer_preparse.loc" />
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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6 </table>
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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7 <!-- Locations of all fasta files under genome directory -->
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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8 <table name="all_fasta" comment_char="#">
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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9 <columns>value, dbkey, name, path</columns>
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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10 <file path="${__HERE__}/test-data/all_fasta.loc" />
5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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11 </table>
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20fae63ba8dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
iuc
parents: 0
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12 <!-- Built-in homer promoter and ID DBs (dir of <env>/share/data, 1 per organism) -->
20fae63ba8dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
iuc
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13 <table name="homer_promoters" comment_char="#">
20fae63ba8dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
iuc
parents: 0
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14 <columns>value, dbkey, organism, path, organism_version, promoter_version</columns>
20fae63ba8dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
iuc
parents: 0
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15 <file path="${__HERE__}/test-data/homer_promoters.loc"/>
20fae63ba8dc planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit 16a919905f336e34e237388c1921d0f4f8a368af
iuc
parents: 0
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16 </table>
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5d2e5fddec81 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_homer_preparse commit e49d856e0181edc6120220a1b819cba2466a4289"
iuc
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17 </tables>