comparison data_manager_conf.xml @ 4:688e5894bb2b draft

Uploaded

3:7cfa2506531d

<data_managers>
    <data_manager tool_file="data_manager/data_manager_gemini_download.xml" id="data_manager_gemini_download" >
        <data_table name="gemini_databases">  <!-- Defines a Data Table to be modified. -->
            <output> <!-- Handle the output of the Data Manager Tool -->
                <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">gemini/data/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gemini/data/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>

4:688e5894bb2b

<data_managers>
    <data_manager tool_file="data_manager/data_manager_gemini_download.xml" id="data_manager_gemini_download" >
        <data_table name="gemini_databases">  <!-- Defines a Data Table to be modified. -->
            <output> <!-- Handle the output of the Data Manager Tool -->
                <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
                <column name="path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">gemini/data/${dbkey}/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gemini/data/${dbkey}/${value}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>