Mercurial > repos > iuc > data_manager_build_kraken2_database

annotate data_manager_conf.xml @ 12:bf7f964a12b7 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit f43fe4223c7cca2dac7549c3dee7e766378588da
author iuc
date Sat, 25 Jan 2025 17:41:35 +0000
parents ce75e9475f0f
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
1 <data_managers>
7
ce75e9475f0f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 096286097ed5cdf189a1b68c3fc34d10f4142e54
iuc
parents: 5
diff changeset
2 <data_manager tool_file="data_manager/kraken2_build_database.xml" id="kraken2_build_database">
0
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
3 <data_table name="kraken2_databases">
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
4 <output>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
5 <column name="value"/>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
6 <column name="name"/>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
7 <column name="path" output_ref="out_file">
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
8 <move type="directory">
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
9 <source>${path}</source>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
10 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">kraken2_databases/${path}</target>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
11 </move>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
12 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/kraken2_databases/${path}</value_translation>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
13 <value_translation type="function">abspath</value_translation>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
14 </column>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
15 </output>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
16 </data_table>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
17 </data_manager>
a7c8b9cd05da planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken2_database/ commit 30d1a86d5c8a3fa434e24ff915f85f51e514ceb2
iuc
parents:
diff changeset
18 </data_managers>