# HG changeset patch
# User iuc
# Date 1508513477 14400
# Node ID e5c951338c64e75a86f53429313de31a6657296c
# Parent  b0d8635e0161a23839cd2f2a999c691b9ed32ba5
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 39a5f30a013c6d71ea84807b72511e3aa4bab147

diff -r b0d8635e0161 -r e5c951338c64 crossmap_bed.xml
--- a/crossmap_bed.xml	Thu Oct 19 12:37:43 2017 -0400
+++ b/crossmap_bed.xml	Fri Oct 20 11:31:17 2017 -0400
@@ -91,7 +91,7 @@
         </test>
 
         <test><!-- clone of first test: tests cached reference chain file -->
-            <param name="input" value="test_bed_01_input_a.bed" ftype="bed"/>
+            <param name="input" value="test_bed_01_input_a.bed" ftype="bed" dbkey="hg18"/>
             <param name="index_source" value="cached"/>
             <param name="merge_unmapped_entries" value="false" />
 
diff -r b0d8635e0161 -r e5c951338c64 macros.xml
--- a/macros.xml	Thu Oct 19 12:37:43 2017 -0400
+++ b/macros.xml	Fri Oct 20 11:31:17 2017 -0400
@@ -28,9 +28,7 @@
             <when value="cached">
                 <param name="input_chain" type="select" label="Lift Over To">
                     <options from_data_table="liftOver">
-                        <!--
                         <filter type="data_meta" ref="input" key="dbkey" column="0"/>
-                        -->
                     </options>
                 </param>
             </when>
diff -r b0d8635e0161 -r e5c951338c64 test-data/cached_locally/liftOver.loc
--- a/test-data/cached_locally/liftOver.loc	Thu Oct 19 12:37:43 2017 -0400
+++ b/test-data/cached_locally/liftOver.loc	Fri Oct 20 11:31:17 2017 -0400
@@ -29,4 +29,4 @@
 #anoCar1	hg18	/depot/data2/galaxy/anoCar1/liftOver/anoCar1ToHg18.over.chain
 #...etc...
 
-A	B	${__HERE__}/aToB.over.chain
+hg18	hg19	${__HERE__}/aToB.over.chain