Mercurial > repos > iuc > crossmap_bed

annotate test-data/test_vcf_01_input.vcf @ 6:541a0c136ad8 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 95fe80d08fb14c4c344da4979290e72261e31ae5"
author iuc
date Thu, 10 Oct 2019 04:03:08 -0400
parents 235ab3277db1
children aa85f6cf1d16
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
1 ##fileformat=VCFv4.2
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype">
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
3 ##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities">
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
4 ##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods">
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMP001 SAMP002
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
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6 1 10 rs11449 G A . PASS . GT 0/0 0/1
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
7 1 100 rs84825 C C . PASS . GT:GP 0/1:. 0/1:0.03,0.97,0
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
8 1 200 rs84823 T G . PASS . GT:PL ./.:. 1/1:10,5,0