Mercurial > repos > iuc > colibread_commet

comparison test-data/discosnp/vcf_file_paired.vcf @ 1:dc31aacc886b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/colibread commit 7e976e65d4630ce8b485efd1d50a168ba98276e6
author iuc
date Fri, 24 Nov 2017 12:45:22 -0500
parents 0b9a713ece1d
children a4d4b2564a2a
comparison
equal deleted inserted replaced
0:0b9a713ece1d 1:dc31aacc886b
10 ##INFO=<ID=UR,Number=1,Type=Integer,Description="length of the unitig right"> 10 ##INFO=<ID=UR,Number=1,Type=Integer,Description="length of the unitig right">
11 ##INFO=<ID=CL,Number=1,Type=Integer,Description="length of the contig left"> 11 ##INFO=<ID=CL,Number=1,Type=Integer,Description="length of the contig left">
12 ##INFO=<ID=CR,Number=1,Type=Integer,Description="length of the contig right"> 12 ##INFO=<ID=CR,Number=1,Type=Integer,Description="length of the contig right">
13 ##INFO=<ID=Genome,Number=1,Type=String,Description="Allele of the reference;for indel reference is . "> 13 ##INFO=<ID=Genome,Number=1,Type=String,Description="Allele of the reference;for indel reference is . ">
14 ##INFO=<ID=Sd,Number=1,Type=Integer,Description="Reverse (-1) or Forward (1) Alignement"> 14 ##INFO=<ID=Sd,Number=1,Type=Integer,Description="Reverse (-1) or Forward (1) Alignement">
15 ##INFO=<ID=XA,Number=0/1,Type=String,Description="Other mapping positions (chromosome_position). Position is negative in case of Reverse alignment. The position designs the starting position of the alignment, not the position of the variant itself.">
15 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> 16 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
16 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Cumulated depth accross samples (sum)"> 17 ##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Cumulated depth accross samples (sum)">
17 ##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Phred-scaled Genotype Likelihoods"> 18 ##FORMAT=<ID=PL,Number=G,Type=Integer,Description="Phred-scaled Genotype Likelihoods">
18 ##FORMAT=<ID=AD,Number=2,Type=Integer,Description="Depth of each allele by sample"> 19 ##FORMAT=<ID=AD,Number=2,Type=Integer,Description="Depth of each allele by sample">
19 ##FORMAT=<ID=HQ,Number=2,Type=Integer,Description="Haplotype Quality"> 20 ##FORMAT=<ID=HQ,Number=2,Type=Integer,Description="Haplotype Quality">