# HG changeset patch
# User iuc
# Date 1534498940 14400
# Node ID 01c7c0d32674e40fcfa9047518bf763246968616
# Parent  b176b1c7949ed0512d3bdd3e82ea79dddcab01e2
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b67e138b17f7e8cb34f59bed0925f691ec9740f3

diff -r b176b1c7949e -r 01c7c0d32674 flankBed.xml
--- a/flankBed.xml	Tue Jul 24 11:49:34 2018 -0400
+++ b/flankBed.xml	Fri Aug 17 05:42:20 2018 -0400
@@ -65,7 +65,11 @@
 
 .. class:: warningmark
 
-In order to prevent creating intervals that violate chromosome boundaries, bedtools flank requires a genome file defining the length of each chromosome or contig.
+In order to prevent creating intervals that violate chromosome boundaries, bedTools flank requires a bedTool genome file defining the length of each chromosome or contig. . This should be a two column tabular file with the chromosome name in the first column and the END coordinate of the chromosome in the second column.
+
+If you need this data for any genome that is at UCSC (http://genome.ucsc.edu), it can be extracted from the Table Browser with the "Get Data: UCSC Main" tool. Set "group" to "All Tables", "table" to "chromInfo", and "output format" to "all fields from selected table". 
+
+
 
 @REFERENCES@
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