Mercurial > repos > iuc > bedtools

diff makeWindowsBed.xml @ 26:c0fbce5dc84a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:20 -0400
parents a2d4c30ba2f9
children b0d5e752c0c5
line wrap: on
line diff
--- a/makeWindowsBed.xml	Wed Sep 14 17:29:56 2016 -0400
+++ b/makeWindowsBed.xml	Mon Oct 17 10:13:20 2016 -0400
@@ -9,9 +9,9 @@
 <![CDATA[
         bedtools makewindows
         #if $type.type_select == 'genome':
-            -g $type.genome
+            -g '$type.genome'
         #else:
-            -b $type.input
+            -b '$type.input'
         #end if
         #if $action.action_select == 'windowsize':
             -w $action.windowsize
@@ -23,7 +23,7 @@
             -s $action.step_size
         #end if
         $sourcename
-        > $output
+        > '$output'
 ]]>
     </command>
     <inputs>